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Glimpses Of Earliest Forms Of Life On Earth
Science Daily ^ | July 18, 2008

Posted on 07/18/2008 5:43:32 AM PDT by Soliton

Some bacterial cells can swim, morph into new forms and even become dangerously virulent - all without initial involvement of DNA. Yale University researchers describe July 18 in the journal Science how bacteria accomplish this amazing feat - and in doing so provide a glimpse of what the earliest forms of life on Earth may have looked like.

(Excerpt) Read more at sciencedaily.com ...


TOPICS: Science
KEYWORDS: darwinsapologists; evolution
Remnant Of Ancient 'RNA World' Discovered
1 posted on 07/18/2008 5:43:32 AM PDT by Soliton
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To: Coyoteman; allmendream

Life from non life ping!


2 posted on 07/18/2008 5:44:22 AM PDT by Soliton (Investigate, study, learn, then express an opinion)
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To: Soliton

Yes, now the new word is “morph.” We all descendantly, from these two meter backstoke bacteria, morphed into ourselves. LOL!


3 posted on 07/18/2008 5:52:51 AM PDT by sirchtruth (Vote Conservative Repuplican!!)
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To: sirchtruth

“We predicted that there would be an ancient ‘RNA city’ out there in the jungle, and we went out and found it,’’ Breaker said

Predictive ability of a theory is evidence that the theory is correct.


4 posted on 07/18/2008 5:55:43 AM PDT by Soliton (Investigate, study, learn, then express an opinion)
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To: Soliton

5 posted on 07/18/2008 5:57:43 AM PDT by theDentist (Qwerty ergo typo : I type, therefore I misspelll.)
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To: theDentist

The RNA World (from 1974)

Virtually all biologists now agree that bacterial cells cannot form from nonliving chemicals in one step. If life arises from nonliving chemicals, there must be intermediate forms, “precellular life.” Of the various theories of precellular life, the most popular contender today is “the RNA world.”

RNA has the ability to act as both genes and enzymes. This property could offer a way around the “chicken-and-egg” problem. (Genes require enzymes; enzymes require genes.) Furthermore, RNA can be transcribed into DNA, in reverse of the normal process of transcription. These facts are reasons to consider that the RNA world could be the original pathway to cells. James Watson enthusiastically praises Sir Francis Crick for having suggested this possibility.


6 posted on 07/18/2008 5:59:15 AM PDT by Soliton (Investigate, study, learn, then express an opinion)
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To: Soliton
Glimpses Of Earliest Forms Of Life On Earth

What the heck??? Where are the pictures of Adam and Eve?????

/s

7 posted on 07/18/2008 6:59:49 AM PDT by Dr._Joseph_Warren
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To: Soliton

RNA is still a complex compound, which has never been observed to form by inorganic means, AFAIK. Besides, even if RNA formed spontaneously, how would it suddenly become an enzyme? Enzymes are parts of the functional system of living cells. I.e. they are manufactured because they have a purpose. A “primordial soup” has no purpose.


8 posted on 07/18/2008 7:14:55 AM PDT by hellbender
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To: hellbender

If you are seeking truth, read this.

http://www.panspermia.org/rnaworld.htm

“An RNA-dependent RNA polymerase ribozyme is the foundation of the entire RNA World hypothesis,” Robertson said. “With that, you would have an RNA capable of making copies of itself; mutations or errors in some copies would result in variations that would be acted on by Darwinian natural selection, and the molecules would evolve into bigger and better ribozymes. That’s what makes this structure so interesting.”


9 posted on 07/18/2008 7:19:48 AM PDT by Soliton (Investigate, study, learn, then express an opinion)
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To: Soliton

There is nothing in the article but a variety of competing theories. No evidence at all. In fact, the focus of the article is that genetic molecules did not form by random processes on earth, but were seeded here from somewhere else...a concept which conveniently displaces the mystery to some extraterrestrial place. This not science, it is really just a new form of creation myth.


10 posted on 07/18/2008 7:32:58 AM PDT by hellbender
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To: Soliton
Some bacterial cells can swim, morph into new forms and even become dangerously virulent


11 posted on 07/18/2008 7:38:08 AM PDT by hellbender
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To: hellbender; Soliton
RNA is capable of enzymatic reactions itself, it doesn't need to become an enzyme, in some forms it IS an enzyme.

Indeed many of the protein enzymes we have still contain a small RNA section where the action happens.

12 posted on 07/18/2008 7:46:28 AM PDT by allmendream (If "the New Yorker" makes a joke, and liberals don't get it, is it still funny?)
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To: hellbender
There is nothing in the article but a variety of competing theories.

I'm sorry that I didn't explain better. The article I asked you to read was to put the article I posted in perspective. ID/Creationist say that a cell is "irreducibly complex" and couldn't have evolved from less complex forms. Sir Francis Crick, who discovered DNA, predicted that if evolution was correct that RNA working as an enzyme could self replicate. This was one year before RNA enzymes were actually discovered. Since then there has been an hypothesis that before cells, there was an RNA world. The problem was that no one had found the right Ribozyme. That is what the article is about. They have found it! We have moved the evolution debate one major step forward to solving the life from non-life riddle.

13 posted on 07/18/2008 7:49:42 AM PDT by Soliton (Investigate, study, learn, then express an opinion)
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To: Soliton
“The tiny RNA molecule, comprised of only two nucleotides, activates a larger RNA structure called a riboswitch. Breaker's lab discovered riboswitches in bacteria six years ago and has since shown that they can regulate a surprising amount of biological activity. Riboswitches, located within single strands of messenger RNA that transmit a copy of DNA’s genetic instructions, can independently “decide’’ which genes in the cell to activate”

Only two nucleotides? That only provides 16 combinations! It will be interesting to see the further levels of regulation that this entails.

A-A
A-U
A-G
A-C
U-A
U-U
U-G
U-C
G-A
G-U
G-G
G-C
C-A
C-U
C-G
C-A

WOW. Sixteen master keys that together can fit any riboswitch lock?

14 posted on 07/18/2008 7:53:25 AM PDT by allmendream (If "the New Yorker" makes a joke, and liberals don't get it, is it still funny?)
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To: allmendream

You can see why those who don’t understand think that design is necessary. It is elegantly simple, even beautiful.

Crick was right again.


15 posted on 07/18/2008 7:56:23 AM PDT by Soliton (Investigate, study, learn, then express an opinion)
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To: Soliton

16 posted on 07/18/2008 8:00:30 AM PDT by DouglasKC
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To: Dr._Joseph_Warren

Post 16...:-)


17 posted on 07/18/2008 8:01:10 AM PDT by DouglasKC
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To: allmendream
James Watson enthusiastically praises Sir Francis Crick for having suggested this possibility :

The time had come to ask how the DNA→ RNA→ protein flow of information had ever got started. Here, Francis was again far ahead of his time. In 1968 he argued that RNA must have been the first genetic molecule, further suggesting that RNA, besides acting as a template, might also act as an enzyme and, in so doing, catalyze its own self-replication.

18 posted on 07/18/2008 8:02:17 AM PDT by Soliton (Investigate, study, learn, then express an opinion)
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To: DouglasKC

Why did they have belly buttons and why did Adam have nipples?


19 posted on 07/18/2008 8:04:59 AM PDT by Soliton (Investigate, study, learn, then express an opinion)
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To: Soliton
Not so much design that they think is necessary, but “intervention of a designer” which implies that the design was flawed to begin with and needs constant tinkering to achieve the desired result.

I have no issue with design in and of itself; I am a Christian and do believe the laws of the universe were designed by God. I object to the suggestion of I.D. proponents (”cdesign proponentists”) that the universe was incompetently designed such that the mechanism in place for the evolution of life was a tool ill suited for the purpose and needs to constantly be superseded by miraculous intervention.

20 posted on 07/18/2008 8:14:30 AM PDT by allmendream (If "the New Yorker" makes a joke, and liberals don't get it, is it still funny?)
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To: Soliton; sirchtruth
“We predicted that there would be an ancient ‘RNA city’ out there in the jungle, and we went out and found it,’’ Breaker said

Predictive ability of a theory is evidence that the theory is correct.


Really... Well, I predict that scientists will study this bacteria through thousands, then millions, and eventually billions of generations, and in the end they will still be bacteria.

Someone mark the date that I made this bold prediction... 7/18/2008.
21 posted on 07/18/2008 8:53:40 AM PDT by Sopater (A wise man's heart inclines him to the right, but a fool's heart to the left. ~ Ecclesiastes 10:2)
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To: Sopater
Well, I predict that scientists will study this bacteria through thousands, then millions, and eventually billions of generations, and in the end they will still be bacteria.

Are you trying to pretend that all bacteria are the same? What about this:

The Phyla of Bacteria (from Bergey's Manual of Systematic Bacteriology 1st ed.)

Name of Phylum Number of Species Number of Genera
Aquificae 27 12
Xenobacteria 29 11
Chrysogenetes 1 1
Thermomicrobia 13 6
Cyanobacteria 78 62
Chlorobia 17 6
Proteobacteria 1644 366
Firmicutes 2474 255
Planctomycetes etc. 13 5
Spirochaetes 92 13
Fibrobacter 5 3
Bacteroids 130 20
Flavobacteria 72 15
Sphingobacteria 76 22
Fusobacteria 29 6
Verrucomicrobia 5 2

22 posted on 07/18/2008 9:14:58 AM PDT by Coyoteman (Religious belief does not constitute scientific evidence, nor does it convey scientific knowledge.)
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To: Coyoteman
Are you trying to pretend that all bacteria are the same?

Certainly not. I'm simply stating that bacteria only reproduce bacteria.
23 posted on 07/18/2008 9:19:56 AM PDT by Sopater (A wise man's heart inclines him to the right, but a fool's heart to the left. ~ Ecclesiastes 10:2)
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To: Sopater

Yes, and bacteria that previously didn’t have the metabolic pathway to digest citrate have been shown to be able to EVOLVE this capability. Pretty amazing that evolution stuff, no?


24 posted on 07/18/2008 9:20:27 AM PDT by allmendream (If "the New Yorker" makes a joke, and liberals don't get it, is it still funny?)
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To: Sopater
Really... Well, I predict that scientists will study this bacteria through thousands, then millions, and eventually billions of generations, and in the end they will still be bacteria.

How do you explain that the fossil record demonstrates an evolution from bacteria (prokaryotes) to more complex forms over billions of years? Did creation take 3.5 billion years?

25 posted on 07/18/2008 9:35:26 AM PDT by Soliton (Investigate, study, learn, then express an opinion)
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To: allmendream
Yes, and bacteria that previously didn’t have the metabolic pathway to digest citrate have been shown to be able to EVOLVE this capability. Pretty amazing that evolution stuff, no?

What I find amazing is how easily you are impressed with such weak evidence.
26 posted on 07/18/2008 9:35:38 AM PDT by Sopater (A wise man's heart inclines him to the right, but a fool's heart to the left. ~ Ecclesiastes 10:2)
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To: Sopater

In what way do you consider the evidence weak?


27 posted on 07/18/2008 9:37:22 AM PDT by allmendream (If "the New Yorker" makes a joke, and liberals don't get it, is it still funny?)
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To: allmendream

I just don’t see variation within a baramin as strong evidence for the ToE. Especially when the “trait” that has been identified as a variation already exists in other similar species, and even in the same species. Call me when scientists have been able to observe a change such as bacteria reproducing a protist of some kind.


28 posted on 07/18/2008 9:58:52 AM PDT by Sopater (A wise man's heart inclines him to the right, but a fool's heart to the left. ~ Ecclesiastes 10:2)
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To: Soliton
How do you explain that the fossil record demonstrates an evolution from bacteria (prokaryotes) to more complex forms over billions of years?

I don't because it doesn't.
29 posted on 07/18/2008 10:00:39 AM PDT by Sopater (A wise man's heart inclines him to the right, but a fool's heart to the left. ~ Ecclesiastes 10:2)
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To: Sopater
No e.coli ever observed has the ability to digest citrate except the citrate plus strain that was observed to evolve in the lab. This is a complex metabolic pathway, the kind of increased complexity that many claim is impossible; now that it has been observed suddenly it is dismissed as not a big deal, but it is.

The rise of eukaryote was thought to take about a billion years, so if such was observed to happen in the lab over a few decades it would make us all rethink how evolution happens rather than being what one would expect.

Indeed such a rapid evolution is only proposed by Creationists who think all modern species were derived from a few pairs of animals loaded onto Noah's ark.

30 posted on 07/18/2008 10:17:23 AM PDT by allmendream (If "the New Yorker" makes a joke, and liberals don't get it, is it still funny?)
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To: allmendream
No e.coli ever observed has the ability to digest citrate except the citrate plus strain that was observed to evolve in the lab.

Tell that to this guy: Cloning and DNA Sequence of a Plasmid-Determined Citrate Utilization System in Escherichia coli

This is a complex metabolic pathway, the kind of increased complexity that many claim is impossible; now that it has been observed suddenly it is dismissed as not a big deal, but it is.

Actually, E.coli does have the ability to digest citrate. The only problem was that it can't get it into it's mouth. According to Lemski's article, he himself said:
E. coli is not wholly indifferent to citrate. It uses a ferric dicitrate transport system for iron acquisition, although citrate does not enter the cell in this process (37, 38). It also has a complete tricarboxylic acid cycle, and can thus metabolize citrate internally during aerobic growth on other substrates (39). E. coli is able to ferment citrate under anoxic conditions if a cosubstrate is available for reducing power (40). The only known barrier to aerobic growth on citrate is its inability to transport citrate under oxic conditions (41–43).(emphasis added)

31 posted on 07/18/2008 11:03:40 AM PDT by Sopater (A wise man's heart inclines him to the right, but a fool's heart to the left. ~ Ecclesiastes 10:2)
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To: Sopater

So your understanding of the fossil record isn’t that it starts with blue-green algae and increases over time to show the emergence of bacteria and protazoa and invertebrates and vertabrates and fish and amphibians and reptiles and mammals?


32 posted on 07/18/2008 11:12:14 AM PDT by Soliton (Investigate, study, learn, then express an opinion)
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To: Sopater
The ability to digest citrate was cloned into the non citrate metabolizing e.coli by introducing plasmids that made the necessary enzymes.

This is quite different than e.coli evolving the ability on its own. The difference between writing a new book and being given an already existing book to read. People said no “new book” could be written using evolutionary means, yet such has been demonstrated. The existence of a different book with the same “message” doesn't discount the fact that this was indeed a “new book” written by an evolving strain of e.coli; not an existing book given to e.coli by way of a plasmid.

From the paper....

The inability of Escherichia coli to utilize citrate as the sole carbon and energy source has been recognized for 60 years and provides the basis for an often-used distinction between Cit- E. coli and many similar but Cit+ bacterial species.

33 posted on 07/18/2008 11:13:36 AM PDT by allmendream (If "the New Yorker" makes a joke, and liberals don't get it, is it still funny?)
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To: allmendream
The very next sentence says:
The recent discovery of naturally occurring plasmids that confer a Cit+ phenotype on E. coli strains (14, 15, 35) has provided an explanation for the periodic isolation of bacteria that would have been called E. coli except for their ability to utilize citrate.
So the only reason that these other bacteria are NOT called "E. coli" is due to their ability to utilize citrate.

You continue to amaze me.
34 posted on 07/18/2008 11:56:47 AM PDT by Sopater (A wise man's heart inclines him to the right, but a fool's heart to the left. ~ Ecclesiastes 10:2)
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To: Soliton

My understanding is that the fossil record is an historic record of catostrophy causing rapid burial of various organisms. Do you have a different understanding?


35 posted on 07/18/2008 12:02:17 PM PDT by Sopater (A wise man's heart inclines him to the right, but a fool's heart to the left. ~ Ecclesiastes 10:2)
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To: Sopater
My understanding is that the fossil record is an historic record of catostrophy causing rapid burial of various organisms. Do you have a different understanding?
36 posted on 07/18/2008 12:29:39 PM PDT by Soliton (Investigate, study, learn, then express an opinion)
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To: Sopater
My understanding is that the fossil record is an historic record of catostrophy causing rapid burial of various organisms. Do you have a different understanding?

You would be correct only if you consider getting stuck and buried in mud or quicksand, or being buried in sediment at the bottom of a body of water, as "catastrophic."

37 posted on 07/18/2008 12:30:31 PM PDT by Coyoteman (Religious belief does not constitute scientific evidence, nor does it convey scientific knowledge.)
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To: Coyoteman
You would be correct only if you consider getting stuck and buried in mud or quicksand, or being buried in sediment at the bottom of a body of water, as "catastrophic."

It would be "catastrophic" for me... ;-)

However, how does an animal become "buried in sediment at the bottom of a body of water" without being consumed by other organisms? It has to happen by rapid burial by sediment.

Even the mud or quicksand scenario is rarely likely to result in fossilization since creatures rarely die by submersion and are more likely to die on the surface due to starvation, dehydration, heat exhaustion, or attack by predatory animals. All resulting in eventually being consumed by other organisms.

Your examples are more the exception than the rule when it comes to fossilization.
38 posted on 07/18/2008 12:48:33 PM PDT by Sopater (A wise man's heart inclines him to the right, but a fool's heart to the left. ~ Ecclesiastes 10:2)
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To: Sopater
Once again, it is the difference between acquiring a set of tools and making them yourself.

Plasmids are often swapped between bacteria, and an e. coli may well come across a plasmid that has the enzymes to digest citrate (yet without the ability to absorb citrate it probably looses it just as fast); this is hardly the same as developing the ability on its own WITHOUT being given a plasmid. Do you understand the difference?

39 posted on 07/18/2008 12:59:25 PM PDT by allmendream (If "the New Yorker" makes a joke, and liberals don't get it, is it still funny?)
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To: Sopater
However, how does an animal become "buried in sediment at the bottom of a body of water" without being consumed by other organisms? It has to happen by rapid burial by sediment.

Even the mud or quicksand scenario is rarely likely to result in fossilization since creatures rarely die by submersion and are more likely to die on the surface due to starvation, dehydration, heat exhaustion, or attack by predatory animals. All resulting in eventually being consumed by other organisms.

Your examples are more the exception than the rule when it comes to fossilization.

Fossilization is rare for precisely this reason. The reasons you give are why forest floors and open environments are so poor at creating fossils.

However, becoming immersed in mud or quicksand is not that difficult to imagine for animals that fall into a pond or river. And its easy to see the nature of the sediment surrounding a fossil. For the vast majority of terrestrial fossils that's just what we get, silt and fine sand (ignoring volcanic deposits for the moment).

40 posted on 07/18/2008 1:08:56 PM PDT by Coyoteman (Religious belief does not constitute scientific evidence, nor does it convey scientific knowledge.)
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To: Soliton
Why did they have belly buttons and why did Adam have nipples?

That's an artistic rendition. In actuality I have no idea what they really looked like or whether or not they had belly buttons.

41 posted on 07/18/2008 6:26:30 PM PDT by DouglasKC
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To: DouglasKC
That's an artistic rendition. In actuality I have no idea what they really looked like or whether or not they had belly buttons.

You posted the picture. I thought you were trying to make a point. Sorry!

42 posted on 07/18/2008 7:06:44 PM PDT by Soliton (Investigate, study, learn, then express an opinion)
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