You touch on some good and interesting points at the end of this post. I take the unpredictability and general inaccessibility of particle matter as another sign of intelligent design, which leaves open a means for direct intervention upon the processes we study, thus making possible physical anomalies, free will, and a host of other potentials that cannot and will not be realized apart from intelligent design.
You take organized matter as a sign of intelligent design and you take "unpredictability and general inaccessibility of particle matter as another sign of intelligent design." Do you actually read the stuff you post, or are you an ELIZA program?
[ELIZA: A program which can be taught to respond to sentences typed by a user in a way that can give the illusion of understanding them, but which in fact relies on pattern matching and substitution to produce answers based on a pre determined set of stock phrases.]