That part of the article was very unclear. The extent of the rainforest ebbs and flows with climactic conditions. The rainforest in Bolivia has been there for a few thousand years but the rainforest as a whole has been there for millions of years.
First Paragraph mentions: “A series of square, straight and ringlike ditches scattered throughout the Bolivian and Brazilian Amazon were there before the rainforest existed, a new study finds.”
This seems to indicate a larger area was previously not rainforest. The article is confusing.