Land it, make the passengers hostages on the plane, refuel it, pack it with explosives, and take off for a pre-determined honker of a target (Israel?).
If the target is Israel and the passengers are still on the plane, that makes for one heck of a catch-22...
I was thinking the same thing. Except a payload capable of an EMP strike. It would have to be a haymaker to be worth it.
If anyone is capable of putting it all together, it is D Company.