Basically martial law. Nobody goes anywhere, threat of quick lethal force if you try to cross lines.
Ebola is a sheer nightmare. Fast moving disease liquifies organs in a couple days. Hell yeah you shut everything down if it starts spreading in an urban environment.
Ok, so how long do the soldiers stay on station? They have families, and being exposed to Ebola isn’t a good way to see them again.
That is the issue. You need people to man the front lines, even though that is the high risk area.