The way it works is they receive information about a given mission. They can be told by their commanders that a certain domestic group is comprised of terrorists or something along those lines.
In other words, they will fire on citizens when given orders based on lies. At least in the beginning. If they get a chance to figure out the politics behind it, most special ops and other troops would likely stand down of their own accord.
Does anyone wonder why so much old school brass has been purged? Why certain heli’s just happened to lose a game of tag with a bunch of SEALS on board? Why ROEs in the sandbox got so many GOOD men killed?
I think the Branch Davidians might disagree with that theory. The federales had months to ponder their legal position and actions given the media lies and confusion surrounding the siege in Waco ... and no one stood down when the order came to attack. They killed everybody and are still sorting out the 'why'.
In a much shorter time-frame, we'll all be dead or on a train to New Auschwitz for re-education or worse before they recognize we are the 'good' guys. They'll be 'just following orders' like the SS who were the special ops of their time.
Yes, the few who do stand down will be given a ride with us.