He is a Christian as it happens, and takes it quite seriously. He's made a recent speech where he's one of the few major western leaders to speak out about the persecution of Christians in the Middle East. People have a very warped idea of the man from the media. He believes in good will to all men of good will, regardless of faith, but his own faith is Christian.
Yes, I understand that the King is supposed to be the head of the Church of England, but the Church of England has abandoned Christianity also so in the famous words of our former Secretary of State and erstwhile Commodity Trading Savant, What Difference does it Make?
It makes a lot of difference to a lot of people. Prince William's recent marriage in a traditional Church service at Westminster Abbey is quite possibly the most watched Christian service around the world in the last decade. The Coronation as a Christian service (and it is) would be even more watched. I agree that the Church of England has lost its way to a large extent, which is one reason I've left it myself (an option far less available to the Prince of Wales, otherwise - that's as far as I can go with that thought!), looking for a better way - but despite the failures of some of the leadership, there's a lot of devout Christians still within it. And these big national services help to remind people of what the Church should be - and to remind Britain of what it should be.