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Computer downtime rising up to work on world's problems
San Antonio Express-News (KRT) ^ | 2/10/06 | NA

Posted on 02/11/2006 11:33:02 AM PST by Drango

Computer downtime rising up to work on world's problems

(San Antonio Express-News (KRT) Via Thomson Dialog NewsEdge) Feb. 10--AUSTIN -- People donating their spare computing power to the World Community Grid are helping to find solutions to some of the world's most vexing problems, such as discovering new drugs to combat AIDS.

More than a quarter of a million PCs worldwide have joined the nonprofit network, letting researchers crunch data faster and more cheaply.

"The World Community Grid takes research projects that were unimaginable by researchers before and makes them possible," said Viktors Berstis, 57, a master inventor at IBM who has led development of the philanthropic project, which his company sponsors.

The grid encourages people, businesses and other organizations around the world with PCs to download software enabling them to donate computer downtime to researchers to solve problems that require supercomputing power.

Organizations partnering with the World Community Grid in donating their idle computing time include Coastal Federal Credit Union, based in Raleigh, N.C., the United Way, the Semiconductor Industry Association and the University of Kentucky.

Grid computing involves linking large numbers of computers together to harness their collective power to solve complex problems. Most grid projects focus on drug development, but other industries ranging from financial services to manufacturing have begun using grid computing in their businesses, according to United Devices, an Austin-based company that created the software behind the project.

The first World Community Grid project, the Human Proteome Folding Project, was launched in November 2004. Researchers created a database that describes the structure of about 120,000 protein domains, spanning 90 complete genomes, that could not be described using traditional approaches.

The database could ultimately help scientists find cures to diseases such as cancer and malaria.

"If the World Community Grid didn't exist, I would probably be doing this for E. coli and tuberculosis and just a few other pathogens," said Richard Bonneau, assistant professor of biology and computer science at New York University and the principal investigator on the Human Proteome Folding Project.

Bonneau and researchers at the Institute for Systems Biology, where the project took place, estimate that it would have taken 100 years to crunch the data to outline the protein structures using only the supercomputers at its center.

"What the grid has allowed me to do is make this more widely accessible," Bonneau said. "In the end, the World Community Grid will have enabled the adoption of a new technology by the biomedical community that is important. If I didn't have the grid, I would have to buy as large a computer as I or my institution could afford." A supercomputer can cost tens of millions of dollars initially and half a million dollars a year or more to operate, Bonneau said. Instead of spending money on computing power, the researchers are able to spend money on advancing the science and solving complex problems, he said.

The latest World Community Grid project is focused on developing better treatments for those infected with HIV in the face of its evolving drug resistance. It's called the FightAIDS@Home project. The Olson Laboratory project at the Scripps Research Institute in La Jolla, Calif., is heading the study.

The project lets researchers run millions of computations to test chemical compounds against proteins found in HIV to find what compounds prevent it from reproducing, said Dr. William Lindstrom, research associate in professor Art Olson's laboratory at the Scripps institute.

"The World Community Grid has allowed us to ask questions we really wouldn't have been able to ask without it," Lindstrom said.

The donation of computer time also means a lot to researchers, he said. "For us, it's really nice to feel like people are participating in our research." Future projects could focus on climate change, pandemic outbreaks, natural disaster predictions and more. The system can tackle all kinds of things impossible today for researchers who don't have access to supercomputing systems, said IBM's Berstis.

As of last week, more than 263,000 PCs in 157 countries are running the World Community Grid. That computation power makes the grid one of the top five supercomputers in the world, Berstis said.

Berstis, who has been with IBM for 28 years, has received 105 patents from the U.S. Patent and Trademark Office and has 100 more pending. Last year he received 15 patents, and he has several patents and patents pending on grid computing.

"You often are annoyed by something," Berstis said. "You have an annoyance. You think of it as an opportunity. Once in a while something pops up in the back of your head as a solution." Berstis started inventing at age 4, when he made crystal radios. He said he has been making electronic "doodads" and studying chemistry, physics and math for years.

"You never know where the latest idea might come from," he said. "You think about the ridiculous and then fix all the problems. You sort of get an idea about what makes sense." The World Community Grid made sense to Berstis.

"Grid computing is bringing a new level of computing power to bear," he said.


TOPICS: Culture/Society; Miscellaneous
KEYWORDS: cancer; folding; freepers
FReepers have a very active "folding" group!

http://www.freerepublic.com/focus/f-chat/1572512/posts

Join us!

1 posted on 02/11/2006 11:33:03 AM PST by Drango
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To: Drango
As of last week, more than 263,000 PCs in 157 countries are running the World Community Grid. That computation power makes the grid one of the top five supercomputers in the world, Berstis said.

Wow...Just wow!

2 posted on 02/11/2006 11:34:40 AM PST by Drango (A liberal's compassion is limited only by the size of someone else's wallet.)
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To: Drango

Folding at Home is easy and painless! It's fun, too, if you're on the "Free Republic Folders - A Tribute to Ronald Reagan" team. Join us!


3 posted on 02/11/2006 11:44:21 AM PST by Clara Lou (A conservative is a liberal who has been mugged by reality. --I. Kristol)
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To: Drango; All

Should we start on FREEPer team on the World Community Grid too?


4 posted on 02/11/2006 12:02:32 PM PST by soccer_maniac (Do some good while browsing FR --> Join our Folding@Home Team# 36120: keyword: folding@home)
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To: Drango

http://www.freerepublic.com/focus/f-chat/1572512/posts


5 posted on 02/11/2006 12:03:07 PM PST by soccer_maniac (Do some good while browsing FR --> Join our Folding@Home Team# 36120: keyword: folding@home)
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To: soccer_maniac
Should we start on FREEPer team on the World Community Grid too?

Nahhhhhhhh. FOCUS. We need every CPU available to "fold". we have 7601 working now, let's try to get to 1,000.

6 posted on 02/11/2006 12:08:06 PM PST by Drango (A liberal's compassion is limited only by the size of someone else's wallet.)
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To: Drango

7601 = 761


7 posted on 02/11/2006 12:10:06 PM PST by Drango (A liberal's compassion is limited only by the size of someone else's wallet.)
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To: Drango

With 200 CPUs we'd be in the Top 25 on the Grid.

http://www.worldcommunitygrid.org/stat/viewStatsByTeamAT.do?sort=members


8 posted on 02/11/2006 12:15:05 PM PST by soccer_maniac (Do some good while browsing FR --> Join our Folding@Home Team# 36120: keyword: folding@home)
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To: Drango
Nahhhhhhhh. FOCUS.

FOLD! FOLD! FOLD!

9 posted on 02/11/2006 12:27:05 PM PST by Flyer (Send Beer)
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To: Drango

How does it affect resources over a few days' time? I might be interested in offering my 2 pcs' downtime, but only if it's not going to do nasty things to the uptime. I've got a K6-3 450 mhz runing WinME (the LAN server) and an Athlon 3000+ running Win2k Pro, and while I don't mind rebooting the more powerful gaming rig, it's a bit of an inconvenience to others on the LAN if I have to take the other machine down too often.


10 posted on 02/11/2006 12:27:28 PM PST by Fire_on_High (I am so proud of what we were...)
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To: Fire_on_High

It doesn't impact your resources at all. WATCH THIS

http://short-media.com/files/thraxfoldingflash/

Then join us here!

http://www.freerepublic.com/focus/f-chat/1572512/posts


11 posted on 02/11/2006 12:31:19 PM PST by Drango (A liberal's compassion is limited only by the size of someone else's wallet.)
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To: Drango

Soooo, have we come out of the closet, so to speak? Or is this just our heads out in the daylight for a sec? :-)


12 posted on 02/11/2006 12:36:06 PM PST by processing please hold (Be careful of charity and kindness, lest you do more harm with open hands than with a clinched fist)
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To: pbrown

Just a quick legit peak ... then low profile once again. ":^)


13 posted on 02/11/2006 1:08:08 PM PST by Bobibutu
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To: Drango

Maybe these machines could find a solution to the problem of radical Islam...


14 posted on 02/11/2006 2:28:20 PM PST by Jack Hammer
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To: Fire_on_High; Drango; soccer_maniac
What happens is, your cpu runs peak on folding when you aren't doing anything on your computer, but when you do anything on your computer, F@H backs down, and whatever your doing will take all the processing power it needs. You'll never know it's even running, unless of course, you become addicted to watching the stats like most of us have. It's fun, it's addictive, and best of all, it's for a VERY good cause !!

Right now, I'm running a XP2400, Duron 950, and a Sempron 2400, all with 2Kpro, using the GUI version, and haven't HAD to reboot due to F@H.

15 posted on 02/11/2006 2:51:34 PM PST by dfwddr (Join our Folding@Home team (Team# 36120) keyword:folding.)
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To: Fire_on_High; Jack Hammer

We have had a Free Republic folding group running for almost two years. It is now a very strong contributor to the Folding@Home project.

Most of us have stayed away from BOINC due to instabilities in their system. The Stanford folding effort is widely recognized as a solid and successful distributed computing system.

Please join us and help promote the peaceful use of computers.


16 posted on 02/11/2006 9:44:47 PM PST by texas booster (Join FreeRepublic's Folding@Home team (Team # 36120))
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To: Fire_on_High

It shouldn't cause you to need to reboot your computer any more than usual. The folding program is very unobstrusive. It downloads a job, sits there folding it quietly, and then uploads it when it's done and downloads the next.

I have noticed that with the GUI version it interferes with some games to have the program running even if folding is paused. When I want to game I shut down the folding program and then start it up again when I'm done. I haven't heard of any issues with the command line version and gaming.

The only concern I might have about it is possible overheating (since the processor is working all the time), and if your computers are clean and well-cooled that shouldn't be a problem.


17 posted on 03/04/2006 9:11:52 AM PST by ahayes
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To: ahayes

Honestly, I've had so many unexplained problems I ended up having to uninstall it off the LAN server. It just screwed up so many things, and I know it's not supposed to...it's only a K6-3 450 mhz so no huge loss for the effort tho. In about 2 weeks I had 46 frames of a 400 frame work unit, but several hundred Firefox crashes, some AVG oddities, and when mIRC started screwing up for the first time ever...buh-bye.

Oddly enough, as notoriously fussy as Everquest is, my gaming rig runs it alongside EQ flawlessly. So, I keep the Athlon 3000+ working away on it and all is well :-) Also gonna see about hubby's 1700+ EQ rig if he'll let me use it.


18 posted on 03/05/2006 5:37:09 AM PST by Fire_on_High (I am so proud of what we were...)
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To: Fire_on_High

That's weird! I'm running it with AVG, Firefox, and ZoneAlarm to boot. Perhaps it is the OS? I'm running WinXP Home.


19 posted on 03/05/2006 5:41:05 AM PST by ahayes
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To: ahayes

Possibly. I've done a lot of tweaking to the WinME install, so it's possible I have long since gotten rid of something f@h expected to be there and needed, or simply that it's not getting along with everything else that I *have* to run, like AVG, Sygate, or Tiny Personal Firewall. Either way...it was so slow that it wasn't doing much. I'd rather get the second Athlon set up for this than keep fighting with this poor ancient crate.


20 posted on 03/05/2006 9:13:09 PM PST by Fire_on_High (I am so proud of what we were...)
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