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Researchers Trace Evolution to Relatively Simple Genetic Changes
Howard Hughes Medical Institute ^ | 25 Narcg 2005 | Staff

Posted on 05/31/2005 12:03:06 PM PDT by PatrickHenry

In a stunning example of evolution at work, scientists have now found that changes in a single gene can produce major changes in the skeletal armor of fish living in the wild.

The surprising results, announced in the March 25, 2005, issue of journal Science, bring new data to long-standing debates about how evolution occurs in natural habitats.

“Our motivation is to try to understand how new animal types evolve in nature,” said molecular geneticist David M. Kingsley, a Howard Hughes Medical Institute investigator at the Stanford University School of Medicine. “People have been interested in whether a few genes are involved, or whether changes in many different genes are required to produce major changes in wild populations.”

The answer, based on new research, is that evolution can occur quickly, with just a few genes changing slightly, allowing newcomers to adapt and populate new and different environments.

In collaboration with zoologist Dolph Schluter, at the University of British Columbia, Vancouver, Canada, and Rick Myers and colleagues at Stanford, Kingsley and graduate student Pamela F. Colosimo focused on a well-studied little fish called the stickleback. The fish — with three bony spines poking up from their backs — live both in the seas and in coastal fresh water habitats all around the northern hemisphere.


Wild populations of stickleback fish have evolved major changes in bony armor styles (shaded) in marine and freshwater environments. New research shows that this evolutionary shift occurs over and over again by increasing the frequency of a rare genetic variant in a single gene.

Sticklebacks are enormously varied, so much so that in the 19th century naturalists had counted about 50 different species. But since then, biologists have realized most populations are recent descendants of marine sticklebacks. Marine fish colonized new freshwater lakes and streams when the last ice age ended 10,000 to 15,000 years ago. Then they evolved along separate paths, each adapting to the unique environments created by large scale climate change.

“There are really dramatic morphological and physiological adaptations” to the new environments, Kingsley said.

For example, “sticklebacks vary in size and color, reproductive behavior, in skeletal morphology, in jaws and teeth, in the ability to tolerate salt and different temperatures at different latitudes,” he said.

Kingsley, Schluter and their co-workers picked one trait — the fish's armor plating — on which to focus intense research, using the armor as a marker to see how evolution occurred. Sticklebacks that still live in the oceans are virtually covered, from head to tail, with bony plates that offer protection. In contrast, some freshwater sticklebacks have evolved to have almost no body armor.

“It's rather like a military decision, to be either heavily armored and slow, or to be lightly armored and fast,” Kingsley said. “Now, in countless lakes and streams around the world these low-armored types have evolved over and over again. It's one of the oldest and most characteristic differences between stickleback forms. It's a dramatic change: a row of 35 armor plates turning into a small handful of plates - or even no plates at all.”

Using genetic crosses between armored and unarmored fish from wild populations, the research team found that one gene is what makes the difference.

“Now, for the first time, we've been able to identify the actual gene that is controlling this trait,” the armor-plating on the stickleback, Kingsley said

The gene they identified is called Eda, originally named after a human genetic disorder associated with the ectodysplasin pathway, an important part of the embryonic development process. The human disorder, one of the earliest ones studied, is called ectodermal dysplasia.

“It's a famous old syndrome,” Kingsley said. “Charles Darwin talked about it. It's a simple Mendelian trait that controls formation of hair, teeth and sweat glands. Darwin talked about `the toothless men of Sind,' a pedigree (in India) that was striking because many of the men were missing their hair, had very few teeth, and couldn't sweat in hot weather. It's a very unusual constellation of symptoms, and is passed as a unit through families.”

Research had already shown that the Eda gene makes a protein, a signaling molecule called ectodermal dysplasin. This molecule is expressed in ectodermal tissue during development and instructs certain cells to form teeth, hair and sweat glands. It also seems to control the shape of - bones in the forehead and nose.

Now, Kingsley said, “it turns out that armor plate patterns in the fish are controlled by the same gene that creates this clinical disease in humans. And this finding is related to the old argument whether Nature can use the same genes and create other traits in other animals.”

Ordinarily, “you wouldn't look at that gene and say it's an obvious candidate for dramatically changing skeletal structures in wild animals that end up completely viable and healthy,' he said. "Eda gene mutations cause a disease in humans, but not in the fish. So this is the first time mutations have been found in this gene that are not associated with a clinical syndrome. Instead, they cause evolution of a new phenotype in natural populations.”

The research with the wild fish also shows that the same gene is used whenever the low armor trait evolves. “We used sequencing studies to compare the molecular basis of this trait across the northern hemisphere,” said Kingsley. “It doesn't matter where we look, on the Pacific coast, the East coast, in Iceland, everywhere. When these fish evolve this low-armored state they are using the same genetic mechanism. It's happening over and over again. It makes them more fit in all these different locations.”

Because this trait evolves so rapidly after ocean fish colonize new environments, he added, “we wondered whether the genetic variant (the mutant gene) that controls this trait might still exist in the ocean fish. So we collected large numbers of ocean fish with complete armor, and we found a very low level of this genetic variant in the marine population.”

So, he said, “the marine fish actually carry the genes for this alternative state, but at such a low level it is never seen;” all the ocean fish remain well-armored. “But they do have this silent gene that allows this alternative form to emerge if the fish colonize a new freshwater location.”

Also, comparing what happens to the ectodysplasin signaling molecule when its gene is mutated in humans, and in fish, shows a major difference. The human protein suffers "a huge amount of molecular lesions, including deletions, mutations, many types of lesions that would inactivate the protein," Kingsley said.

But in contrast, “in the fish we don't see any mutations that would clearly destroy the protein.” There are some very minor changes in many populations, but these changes do not affect key parts of the molecule. In addition, one population in Japan used the same gene to evolve low armor, but has no changes at all in the protein coding region. Instead, Kingsley said, “the mutations that we have found are, we think, in the (gene's) control regions, which turns the gene on and off on cue.” So it seems that evolution of the fish is based on how the Eda gene is used; how, when and where it is activated during embryonic growth.

Also, to be sure they're working with the correct gene, the research team used genetic engineering techniques to insert the armor-controlling gene into fish “that are normally missing their armor plates. And that puts the plates back on the sides of the fish,” Kingsley said.

“So, this is one of the first cases in vertebrates where it's been possible to track down the genetic mechanism that controls a dramatic change in skeletal pattern, a change that occurs naturally in the wild,” he noted.

“And it turns out that the mechanisms are surprisingly simple. Instead of killing the protein (with mutations), you merely adjust the way it is normally regulated. That allows you to make a major change in a particular body region - and produces a new type of body armor without otherwise harming the fish.”


TOPICS: Culture/Society; Miscellaneous; Philosophy
KEYWORDS: crevolist; evolution; genetics; godsgravesglyphs; helixmakemineadouble; massextinction; ordovician; phenryjerkalert; trilobite; trilobites
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Bold and underlining added by me.

Could this be -- gasp! -- macro-evolution? O the horror! Everyone be nice.

1 posted on 05/31/2005 12:03:10 PM PDT by PatrickHenry
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To: VadeRetro; Junior; longshadow; RadioAstronomer; Doctor Stochastic; js1138; Shryke; RightWhale; ...
EvolutionPing
A pro-evolution science list with over 280 names.
See the list's description at my freeper homepage.
Then FReepmail to be added or dropped.

2 posted on 05/31/2005 12:04:33 PM PDT by PatrickHenry (Felix, qui potuit rerum cognoscere causas. The List-O-Links is at my homepage.)
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To: PatrickHenry

> Could this be -- gasp! -- macro-evolution?

No, it can't. If it was macro-evolution, the stickleback would have evolved legs, rack and pinion steering and warp drive. Anything less is *micro* evolution, and is wholly irrelevant to everything. Look away.


3 posted on 05/31/2005 12:05:26 PM PDT by orionblamblam ("You're the poster boy for what ID would turn out if it were taught in our schools." VadeRetro)
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Comment #4 Removed by Moderator

To: PatrickHenry
Could this be -- gasp! -- macro-evolution? O the horror! Everyone be nice.

Did it turn into something other than a fish?

5 posted on 05/31/2005 12:10:46 PM PDT by EternalVigilance ("We, the people, are the rightful masters of both Congress and the courts..." -Abraham Lincoln)
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To: All

Yeah....but a fish is still a fish as time goes by.


Seriously, they may have demonstrated how one type of fish turned into another type of fish, but I don't see a fish turning into a dog or a giraffe. If this process is actually true, why isn't it still happening, or why haven't we found any real examples of intermediate species anywhere in the fossil record (that I'm aware of). Something that truly appears to be a cross between one species and another. Like the Creature from the Black Lagoon.....


6 posted on 05/31/2005 12:13:31 PM PDT by blueblazes
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To: orionblamblam

Wow! Let's see, we start with a "stickleback" fish, covered with armor, and after "evolving" it loses this armor. It happens over and over again, and the result is... a "stickleback" fish that has lost its armor. Sorry, I don't see it. Is this the best that science has to offer as proof of evolution? That is weak.


7 posted on 05/31/2005 12:15:18 PM PDT by Sopater
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To: PatrickHenry
But.....it is still a FISH.
If they really believed evolution to be true, a much better study would be to see if variations in this gene caused the fish to become, lets say .... a bug. Wait, lets make it a bit easier, maybe it could become a squid. They both live in the water at least.

Sounding sarcastic, but with good natured intentions,
GE
8 posted on 05/31/2005 12:16:11 PM PDT by GrandEagle
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To: orionblamblam
No, it can't. If it was macro-evolution, the stickleback would have evolved legs, rack and pinion steering and warp drive. Anything less is *micro* evolution, and is wholly irrelevant to everything. Look away. LOL
9 posted on 05/31/2005 12:16:55 PM PDT by Atheist_Canadian_Conservative
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To: EternalVigilance

Beautiful article


10 posted on 05/31/2005 12:17:18 PM PDT by Soliton (Alone with everyone else.)
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To: Sopater
My congratulations on an excellent simulation of the sort of strawman arguement, weak rhetoric and outright misinformation used by the anti-evolutionist crowd.
11 posted on 05/31/2005 12:18:20 PM PDT by orionblamblam ("You're the poster boy for what ID would turn out if it were taught in our schools." VadeRetro)
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To: blueblazes

You can imagine seraphims and cherubims, but your imagination is so limited that you can't imagine a fish evolving into a frog over millions of years?


12 posted on 05/31/2005 12:18:46 PM PDT by Soliton (Alone with everyone else.)
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To: PatrickHenry

Yes, maybe those pieces of skeletal armor will turn into little wings and the fish can fly away on them.


13 posted on 05/31/2005 12:19:39 PM PDT by PetroniusMaximus
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To: PatrickHenry

If a fish doesn't give birth to a petunia, it isn't macroevolution.


14 posted on 05/31/2005 12:20:04 PM PDT by js1138 (e unum pluribus)
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To: PatrickHenry

Ditches to be defended:

It's still a Sticlkeback.
It's still a fish.
It's still an animal.
It's still material.
Stalin became a Communist due to Darwin.


15 posted on 05/31/2005 12:20:17 PM PDT by Doctor Stochastic (Vegetabilisch = chaotisch is der Charakter der Modernen. - Friedrich Schlegel)
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To: blueblazes
why haven't we found any real examples of intermediate species anywhere in the fossil record (that I'm aware of).

To help you to become aware:
29+ Evidences for Macroevolution. Yes, macro-evolution.
Plagiarized Errors and Molecular Genetics. Anatomic similarities are confirmed by DNA similarities and copying errors.
Evidence of Evolutionary Transitions. There really is evidence out there.
Macroevolution: Evidence. Great info & links from the U. of Illinois website.
Transitional Vertebrate Fossils FAQ. Yes, transitional fossils exist.
Fossil whale with legs. Land animal to whale transitional fossil.
Feathered Dinosaurs.
Archaeopteryx. Reptile-to- bird transitional fossil.
Archaeopteryx: FAQS . A true transitional fossil

Further information:
The List-O-Links.
How to argue against a scientific theory.

Another service of
Darwin Central
The conspiracy that cares

16 posted on 05/31/2005 12:21:04 PM PDT by PatrickHenry (Felix, qui potuit rerum cognoscere causas. The List-O-Links is at my homepage.)
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To: Soliton

Who said I can imagine seraphims and cherubims? You're assuming something that I certainly never said. What I would say here is that there is no evidence, that I am aware of, of an actual intermediate species - something between say, a fish and a turtle. Imagination, no matter HOW LONG it takes is not science nor evidence. It's....imagination. A fish is still a fish. Show me the evidence, don't show me imagination. In dem waters do dragons live.


17 posted on 05/31/2005 12:21:50 PM PDT by blueblazes
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To: PatrickHenry

If sticklebacks taken from one locale can still interbreed with the others, what does this prove?

Seen some pretty goofy looking families -- especially those with too much inbreeding -- but they are just "normal" variants within the human species. Or consider our friend canis familiaris, with the chihuahua and the Great Dane. No one would seriously argue that either has become "less dog."

Of course genes drive morphology!


18 posted on 05/31/2005 12:23:09 PM PDT by Elpasser
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To: PatrickHenry

This does nothing to verify macro-evolution. It does more to ridicule the claims of macro-evolutionists.


19 posted on 05/31/2005 12:24:35 PM PDT by bigcat32 ("Progressive" is a word for old fashioned socialism.)
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To: PatrickHenry

20 posted on 05/31/2005 12:25:08 PM PDT by NCjim (The more I use Windows, the more I love UNIX)
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