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Scientists place 500-million-year-old gene in modern organism (Ruh-Roh!)
Phys.org ^ | 11 July 2012 | Provided by Georgia Institute of Technology

Posted on 07/11/2012 1:21:48 PM PDT by Red Badger

It's a project 500 million years in the making. Only this time, instead of playing on a movie screen in Jurassic Park, it's happening in a lab at the Georgia Institute of Technology.

Using a process called paleo-experimental evolution, Georgia Tech researchers have resurrected a 500-million-year-old gene from bacteria and inserted it into modern-day Escherichia coli(E. coli) bacteria. This bacterium has now been growing for more than 1,000 generations, giving the scientists a front row seat to observe evolution in action.

"This is as close as we can get to rewinding and replaying the molecular tape of life," said scientist Betül Kaçar, a NASA astrobiology postdoctoral fellow in Georgia Tech's NASA Center for Ribosomal Origins and Evolution. "The ability to observe an ancient gene in a modern organism as it evolves within a modern cell allows us to see whether the evolutionary trajectory once taken will repeat itself or whether a life will adapt following a different path."

In 2008, Kaçar's postdoctoral advisor, Associate Professor of Biology Eric Gaucher, successfully determined the ancient genetic sequence of Elongation Factor-Tu (EF-Tu), an essential protein in E. coli. EFs are one of the most abundant proteins in bacteria, found in all known cellular life and required for bacteria to survive. That vital role made it a perfect protein for the scientists to answer questions about evolution.

After achieving the difficult task of placing the ancient gene in the correct chromosomal order and position in place of the modern gene within E. coli, Kaçar produced eight identical bacterial strains and allowed "ancient life" to re-evolve. This chimeric bacteria composed of both modern and ancient genes survived, but grew about two times slower than its counterpart composed of only modern genes.

"The altered organism wasn't as healthy or fit as its modern-day version, at least initially," said Gaucher, "and this created a perfect scenario that would allow the altered organism to adapt and become more fit as it accumulated mutations with each passing day."

The growth rate eventually increased and, after the first 500 generations, the scientists sequenced the genomes of all eight lineages to determine how the bacteria adapted. Not only did the fitness levels increase to nearly modern-day levels, but also some of the altered lineages actually became healthier than their modern counterpart.

When the researchers looked closer, they noticed that every EF-Tu gene did not accumulate mutations. Instead, the modern proteins that interact with the ancient EF-Tu inside of the bacteria had mutated and these mutations were responsible for the rapid adaptation that increased the bacteria's fitness. In short, the ancient gene has not yet mutated to become more similar to its modern form, but rather, the bacteria found a new evolutionary trajectory to adapt.

These results were presented at the recent NASA International Astrobiology Science Conference. The scientists will continue to study new generations, waiting to see if the protein will follow its historical path or whether it will adopt via a novel path altogether.

"We think that this process will allow us to address several longstanding questions in evolutionary and molecular biology," said Kaçar. "Among them, we want to know if an organism's history limits its future and if evolution always leads to a single, defined point or whether evolution has multiple solutions to a given problem."


TOPICS: Culture/Society; US: Georgia
KEYWORDS: 500million; bacteria; bacteriagene; gene; godsgravesglyphs; helixmakemineadouble; madscientists
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To: Darksheare
they'll prolly think everything is okydoky till one day it stands up on it's hind legs and grabs them by the throat...
41 posted on 07/11/2012 2:48:04 PM PDT by Chode (American Hedonist - *DTOM* -ww- NO Pity for the LAZY)
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To: Chode

Patiently it waited, the protoplasmic entity watched the bustling technicians scurry around the room.
Waiting for one to get close enough...


42 posted on 07/11/2012 2:55:32 PM PDT by Darksheare (You will never defeat Bok Choy!)
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To: DManA

Exactly what I was thinking. How did they determine this
gene was 500 million years old? Cause it was found in
presently existing bacteria which are SUPPOSEDLY very old?

Did they find a bacteria with a time clock in it that read
500 million years, buried under sedimentary rock?
It also appears that the epigenetic mechanisms involved
in genome influence change also. So what does that tell
you about how the gene mutates? Do genes mutate around
a “successful” sequence? (i.e. anything that goes outside
that sequence is harmful to the organisms survival). I.e.
it mutates within a “shere of successful” sequences and not
outside it.

anyway, as always, many other questions.


43 posted on 07/11/2012 2:59:39 PM PDT by Getready (Wisdom is more valuable than gold and diamonds, and harder to find.)
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To: Red Badger

Yup a very bad bug in its own right.


44 posted on 07/11/2012 2:59:56 PM PDT by mcshot (God bless the USA! OMG PLEASE vote ABO or OWW and our Country dies.)
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To: Red Badger; Taffini
...and in an e. coli for goodness sakes............

Everything had to start somewhere.

45 posted on 07/11/2012 3:02:09 PM PDT by UCANSEE2 (Lame and ill-informed post)
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To: Reeses

I have long thought this was a rather cool idea.

If you could get a bacteria to grow in ‘Martian’ conditions - the question would no longer be “Is there or was there ever life on Mars”; it would be “Do we want there to be life on Mars?”.


46 posted on 07/11/2012 3:06:49 PM PDT by allmendream (Tea Party did not send GOP to D.C. to negotiate the terms of our surrender to socialism)
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To: Taffini
why would you grow something in poop?

Most life forms grow rather well in poop.

47 posted on 07/11/2012 3:07:43 PM PDT by UCANSEE2 (Lame and ill-informed post)
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To: UCANSEE2

No mask or gloves. It must be harmless. (/s maybe)


48 posted on 07/11/2012 3:09:02 PM PDT by Selene
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To: Red Badger

49 posted on 07/11/2012 3:10:31 PM PDT by UCANSEE2 (Lame and ill-informed post)
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To: Rokurota
It’s a best guess, based on today’s sequences, at what the sequence was 500 million years ago.

Considering it 'evolved' a little differently than they thought it would, maybe their best guess wasn't on the money either.

The REALLY interesting point is that no matter what the conjured up to start with (whether they were correct or not), it seemed to figure out what to do to adapt.

50 posted on 07/11/2012 3:16:44 PM PDT by UCANSEE2 (Lame and ill-informed post)
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To: Red Badger
Considering it was Georgia Tech, it probably was a,
“Hold muh flask and watch this!” moment...............

Nah, yer’ confusin Georgia Tech with the
Paleolithic Monstrosity of University of Georgia

Where the E. Coli have further devolved into Faculty an Students.
The Boosters are devolved Rickettsia, an intracellular parasite

/Georgia Tech Alumnus

51 posted on 07/11/2012 3:25:32 PM PDT by HangnJudge
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To: Red Badger

Just what we need—more coliform variants. Do these people have functioning cerebral cortices?


52 posted on 07/11/2012 3:35:13 PM PDT by Silentgypsy (If you love your freedom, thank a vet.)
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To: stephenjohnbanker

Ready for what?


53 posted on 07/11/2012 3:40:23 PM PDT by Silentgypsy (If you love your freedom, thank a vet.)
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To: Darksheare

Thank you for my first lol of the day!


54 posted on 07/11/2012 3:44:46 PM PDT by Silentgypsy (If you love your freedom, thank a vet.)
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To: UCANSEE2; massmike; Darksheare

Took a little longer than expected, but I see that Helen Thomas finally showed up.


55 posted on 07/11/2012 3:46:52 PM PDT by Flotsam_Jetsome (If America were a car, the "Check President" light would be on.)
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To: Red Badger

“Hold muh flask and watch this!” moment...............

Thank you for my second huge lol of the day!


56 posted on 07/11/2012 3:47:18 PM PDT by Silentgypsy (If you love your freedom, thank a vet.)
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To: Sir Napsalot

And that isn’t even news since it (what ever the heck it is) was done in 2008.


57 posted on 07/11/2012 3:49:34 PM PDT by DManA
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To: Darksheare
absolutely Gott verdamn right!!!

Summoning the Master
Call forth his form most vile
Champing mass of questing flesh
Protoplasmic pile
Ancient hunger, never filled
Until the universe is killed
The endless host of merging soul
That's sucked into the feeding hole

58 posted on 07/11/2012 3:54:43 PM PDT by Chode (American Hedonist - *DTOM* -ww- NO Pity for the LAZY)
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To: Silentgypsy

Welcome!


59 posted on 07/11/2012 4:00:10 PM PDT by Darksheare (You will never defeat Bok Choy!)
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To: Flotsam_Jetsome

YIKES!


60 posted on 07/11/2012 4:11:36 PM PDT by Darksheare (You will never defeat Bok Choy!)
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